Niemann-Pick Disease Type C

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Summary

Clinical characteristics.

Niemann-Pick disease type C (NPC) is a slowly progressive lysosomal disorder whose principal manifestations are age dependent. The manifestations in the perinatal period and infancy are predominantly visceral, with hepatosplenomegaly, jaundice, and (in some instances) pulmonary infiltrates. From late infancy onward, the presentation is dominated by neurologic manifestations. The youngest children may present with hypotonia and developmental delay, with the subsequent emergence of ataxia, dysarthria, dysphagia, and, in some individuals, epileptic seizures, dystonia, and gelastic cataplexy. Although cognitive impairment may be subtle at first, it eventually becomes apparent that affected individuals have a progressive dementia.

Older teenagers and young adults may present predominantly with apparent early-onset dementia or psychiatric manifestations; however, careful examination usually identifies typical neurologic signs.

Diagnosis/testing.

The diagnosis of NPC is established in a proband with suggestive findings and biallelic pathogenic variants in either NPC1 or NPC2 identified by molecular genetic testing.

Management.

Treatment of manifestations: No curative therapy for NPC exists. Supportive therapy is provided by specialists from multiple disciplines including among others: neurology, physical therapy, occupational therapy, speech therapy, nutrition, feeding, psychology, social work, and medical genetics.

Treatment with miglustat, approved for the management of neurologic manifestations of NPC in several countries but not the United States, has increased survival by five years from date of diagnosis or approximately ten years from onset of neurologic manifestations.

Surveillance: Routine follow up by multidisciplinary specialists to monitor disease progression and supportive management including psychosocial support to identify new manifestations of disease, and, for those on miglustat, to assess compliance, possible side effects, and appearance of conditions that would prompt discontinuation of therapy.

Agents/circumstances to avoid: Drugs that cause excessive salivation or that may exacerbate seizures directly by interacting with antiepileptic drugs; alcohol as well as many drugs that exacerbate ataxia.

Evaluation of relatives at risk: It is appropriate to clarify the genetic status of apparently asymptomatic older and younger at-risk relatives of an affected individual in order to identify as early as possible those who are symptomatic and would benefit from prompt initiation of treatment.

Genetic counseling.

NPC is inherited in an autosomal recessive manner. If both parents are known to be heterozygous for an NPC-related pathogenic variant, each sib of an affected individual has at conception a 25% chance of being affected, a 50% chance of being a heterozygote, and a 25% chance of being unaffected and not a heterozygote. Once the NPC-causing pathogenic variants have been identified in an affected family member, carrier testing for at-risk relatives, prenatal testing for a pregnancy at increased risk, and preimplantation genetic testing are possible.

Diagnosis

No consensus clinical diagnostic criteria for Niemann-Pick disease type C (NPC) have been published.

Suggestive Findings

NPC should be suspected in individuals with the following clinical findings [Patterson et al 2017] (full text) and preliminary laboratory findings.

Clinical Findings

Typical findings. Presentations may be conveniently considered by age of onset, although this grouping is of necessity arbitrary and includes considerable overlap.

  • Early infantile (age <2 years). Fetal ascites or neonatal liver disease, particularly when the latter is accompanied by prolonged jaundice and pulmonary infiltrates
  • Late infantile (ages 2 to <6 years). Often presents with hypotonia and developmental delay. With time, vertical supranuclear saccadic palsy becomes apparent. Children later develop clumsiness that evolves into ataxia.
  • Juvenile (ages 6 to <15 years). These children may present initially with clumsiness that evolves into ataxia, often with academic difficulties that may be misdiagnosed as attention deficit disorder. With time, more global cognitive impairment and regression become evident. Vertical supranuclear gaze palsy (sometimes called vertical supranuclear saccadic paresis) is almost invariably present in children with neurologic manifestations (and is often present before the emergence of other symptoms). Some children develop seizures, gelastic cataplexy, dystonia, and/or spasticity.
  • Adolescent/adult (age >15 years). May include all of the neurologic manifestations, which are often overshadowed, at least initially, by cognitive impairment (early-onset dementia) or psychiatric manifestations (e.g., treatment-resistant depression, schizophreniform illness, apparent bipolar disease).
  • Other. Some individuals present with isolated splenomegaly in childhood, and may not develop neurologic manifestations for many years. Occasionally, adults have splenomegaly without neurologic manifestations.

Atypical findings include ataxia, splenomegaly, vertical supranuclear gaze palsy, dysarthria, dysphagia, early-onset dementia, treatment-resistant psychiatric symptoms in young adults, gelastic cataplexy, dystonia, and epilepsy (particularly if treatment-resistant) (see Patterson et al [2017], Table 1).

Suspicion index. The sensitivity of a quantitative scoring system that weighs the manifestations of NPC to assist clinicians in identifying individuals appropriate for further laboratory investigation [Wijburg et al 2012] was improved by separating children into two age groups: ≤4 years and >4 years [Pineda et al 2019].

Preliminary Laboratory Findings

Assay of oxysterols has largely replaced skin biopsy (see Clinical Description), and is now regarded as both a robust screening test and a first-line diagnostic test for NPC [Porter et al 2010, Jiang et al 2011, Geberhiwot et al 2018].

Family History

Family history is consistent with autosomal recessive inheritance (e.g., affected sibs and/or parental consanguinity). Absence of a known family history does not preclude the diagnosis.

Establishing the Diagnosis

The diagnosis of NPC is established in a proband with suggestive findings and biallelic pathogenic variants in either NPC1 or NPC2 identified by molecular genetic testing (see Table 1).

Note: Identification of biallelic NPC1 or NPC2 variants of uncertain significance (or identification of one known NPC1 or NPC2 pathogenic variant and one NPC1 or NPC2 variant of uncertain significance) does not establish or rule out a diagnosis of this disorder.

Molecular genetic testing approaches can include a combination of gene-targeted testing (multigene panel) and comprehensive genomic testing (exome sequencing, genome sequencing) depending on the phenotype.

Gene-targeted testing requires that the clinician determine which gene(s) are likely involved, whereas genomic testing does not. Individuals with the distinctive findings described in Suggestive Findings are likely to be diagnosed using gene-targeted testing (see Option 1), whereas those in whom the diagnosis of NPC has not been considered are more likely to be diagnosed using genomic testing (see Option 2).

Option 1

A multigene panel that includes NPC1, NPC2, and other genes of interest (see Differential Diagnosis) is most likely to identify the genetic cause of the condition at the most reasonable cost while limiting identification of variants of uncertain significance and pathogenic variants in genes that do not explain the underlying phenotype. Panels to consider include those for lysosomal disorders, treatable neurometabolic disorders, mendelian disorders with psychiatric symptoms, and metabolic nonimmune fetal hydrops. Note: (1) The genes included in the panel and the diagnostic sensitivity of the testing used for each gene vary by laboratory and are likely to change over time. (2) Some multigene panels may include genes not associated with the condition discussed in this GeneReview. (3) In some laboratories, panel options may include a custom laboratory-designed panel and/or custom phenotype-focused exome analysis that includes genes specified by the clinician. (4) Methods used in a panel may include sequence analysis, deletion/duplication analysis, and/or other non-sequencing-based tests.

For an introduction to multigene panels click here. More detailed information for clinicians ordering genetic tests can be found here.

Chromosomal microarray analysis (CMA) uses oligonucleotide or SNP arrays to detect genome-wide large deletions/duplications (including NPC1 and NPC2) that cannot be detected by sequence analysis.

Option 2

Comprehensive genomic testing does not require the clinician to determine which gene is likely involved. Exome sequencing is most commonly used; genome sequencing is also possible.

For an introduction to comprehensive genomic testing click here. More detailed information for clinicians ordering genomic testing can be found here.

Table 1.

Molecular Genetic Testing Used in Niemann-Pick Disease Type C

Gene 1Proportion of NPC
Attributed to Pathogenic
Variants in Gene
Proportion of Pathogenic Variants 2, 3 Detectable by Method
Sequence analysis 4Gene-targeted deletion/duplication analysis 5Chromosomal microarray analysis6
NPC195%76%22%2%
NPC25%88%12%0
1.

See Table A. Genes and Databases for chromosome locus and protein.

2.

See Molecular Genetics for information on variants detected in these genes.

3.

Data derived from the subscription-based professional view of Human Gene Mutation Database [Stenson et al 2017]

4.

Sequence analysis detects variants that are benign, likely benign, of uncertain significance, likely pathogenic, or pathogenic. Variants may include small intragenic deletions/insertions and missense, nonsense, and splice site variants; typically, exon or whole-gene deletions/duplications are not detected. For issues to consider in interpretation of sequence analysis results, click here.

5.

Gene-targeted deletion/duplication analysis detects intragenic deletions or duplications. Methods used may include quantitative PCR, long-range PCR, multiplex ligation-dependent probe amplification (MLPA), and a gene-targeted microarray designed to detect single-exon deletions or duplications.

6.

Chromosomal microarray analysis (CMA) uses oligonucleotide or SNP arrays to detect genome-wide large deletions/duplications (including NPC1 and NPC2) that cannot be detected by other methods of deletion/duplication analysis. The ability to determine the size of the deletion/duplication depends on the type of microarray used and the density of probes in the 18q11​.2 region that includes NPC1, and in the 14q24​.3 region that includes NPC2. CMA designs in current clinical use target these regions.

Clinical Characteristics

Clinical Description

Niemann-Pick disease type C (NPC) is a slowly progressive lysosomal disorder whose principal manifestations are age dependent. The manifestations in the perinatal period and infancy are predominantly visceral, with hepatosplenomegaly, jaundice, and (in some instances) pulmonary infiltrates.

From late infancy onward, the presentation is dominated by neurologic manifestations. The youngest children may present with hypotonia and developmental delay, with the subsequent emergence of ataxia, dysarthria, dysphagia, and (in some individuals) epileptic seizures, dystonia, and gelastic cataplexy. Although cognitive impairment may be subtle at first, it eventually becomes apparent that affected individuals have a progressive dementia.

Older teenagers and young adults may present predominantly with apparent early-onset dementia or psychiatric manifestations; however, careful examination usually identifies typical neurologic signs.

Table 2.

Niemann-Pick Disease Type C: Comparison of Age-Related Phenotypes by Select Features

FeaturePhenotypes
Visceral
neurodegenerative
NeurodegenerativePsychiatric-
neurodegenerative
Early infantile
(age <2 yrs)
Late infantile
(2 to <6 yrs)
Juvenile
(6 to <15 yrs)
Adult (>15 yrs)
Hepatomegaly
Splenomegaly(●)
Ataxia
Epilepsy(●)
Cataplexy(●)
Dementia(●)
Psychiatric
Dystonia(●)
VSGP

VSGP = vertical supranuclear gaze palsy; (●) = sometimes present; ● = usually present

Neonatal and Infantile Presentations

The presentation of NPC in early life is nonspecific and may go unrecognized by inexperienced clinicians. On occasion, ultrasound examination in late pregnancy has detected fetal ascites; infants thus identified typically have severe neonatal liver disease with jaundice and persistent ascites.

Infiltration of the lungs with foam cells may accompany neonatal liver disease or occur as a primary presenting feature (pulmonary failure secondary to impaired diffusion).

Many infants succumb at this stage. Of those who survive, some are hypotonic and delayed in psychomotor development, whereas others may have complete resolution of symptoms, only to present with neurologic disease many years later. Liver and spleen are enlarged in children with symptomatic hepatic disease; however, children who survive often "grow into their organs," so that organomegaly may not be detectable later in childhood. Indeed, many individuals with NPC never have organomegaly. The absence of organomegaly never eliminates the diagnosis of NPC.

Another subgroup of children has minimal or absent hepatic or pulmonary dysfunction and presents primarily with hypotonia and delayed development. Children in this group usually do not have vertical supranuclear gaze palsy (VSGP) at the onset but acquire this sign after a variable period, when other evidence of progressive encephalopathy supervenes.

Childhood Presentations

The classic presentation of NPC is in middle-to-late childhood, with clumsiness and gait disturbance that eventually become frank ataxia. Many observant parents are aware of impaired vertical gaze, which is an early manifestation. VSGP first manifests as increased latency in initiation of vertical saccades, after which saccadic velocity gradually slows and is eventually lost. In late stages of the illness, horizontal saccades are also impaired. The physical manifestations are accompanied by insidiously progressive cognitive impairment, often mistaken at first for simple learning disability. Some children are thought to have primary behavioral disturbances, reflecting unrecognized dyspraxia in some instances. As the disease progresses, it becomes clear that the child is mentally deteriorating.

In addition to the manifestations outlined above, many children develop dystonia, typically beginning as action dystonia in one limb and gradually spreading to involve all of the limbs and axial muscles. Speech gradually deteriorates, with a mixed dysarthria and dysphonia. Dysphagia progresses in parallel with the dysarthria, and oral feeding eventually becomes impossible.

Approximately one third of individuals with NPC have partial and/or generalized seizures. Epilepsy may be refractory to medical therapy in some cases. Seizures usually improve if the child's survival is prolonged, this improvement presumably reflecting continued neuronal loss. About 20% of children with NPC have gelastic cataplexy, a sudden loss of muscle tone evoked by a strong emotional (humorous) stimulus. This can be disabling in those children who experience daily multiple attacks, during which injuries may occur.

Mild demyelinating peripheral neuropathy has been described in a child with otherwise typical late-infantile NPC [Zafeiriou et al 2003]. This finding is likely a rare manifestation of NPC because prospective nerve conduction studies in a cohort of 41 affected individuals participating in a clinical trial of miglustat have identified only one case to date [Patterson, personal communication].

Polysomnographic and biochemical studies have demonstrated disturbed sleep and variable reduction in cerebrospinal fluid hypocretin concentration in individuals with NPC, suggesting that the disease could have a specific impact on hypocretin-secreting cells of the hypothalamus [Kanbayashi et al 2003, Vankova et al 2003].

Death from aspiration pneumonia usually occurs in the late second or third decade [Walterfang et al 2012b].

Adolescent and Adult Presentations

Adolescents or adults may present with neurologic disease as described in the preceding section, albeit with a much slower rate of progression. The author has seen one individual who survived into the seventh decade, having first developed symptoms 25 years earlier. Older individuals may also present with apparent psychiatric illness [Imrie et al 2002, Josephs et al 2003], sometimes appearing to have major depression or schizophrenia. The psychiatric manifestations may overshadow neurologic signs, although the latter can usually be detected with careful examination. An adult presenting with bipolar disorder has been described [Sullivan et al 2005].

A German report describes two individuals with adult-onset dementia associated with frontal lobe atrophy and no visceral manifestations, as is common in adult-onset disease [Klünemann et al 2002].

Other Studies

Imaging. MRI of the brain is usually normal until the late stages of the illness. At that time, marked atrophy of the superior/anterior cerebellar vermis, thinning of the corpus callosum, and mild cerebral atrophy may be seen. Increased signal in the periatrial white matter, reflecting secondary demyelination, may also occur. In one adult, areas of confluent white matter signal hyperintensity mimicked multiple sclerosis [Grau et al 1997]. Quantitative MRI studies in adults with NPC have found widespread gray and white matter abnormalities [Walterfang et al 2010], and reduction in callosal volume as the disease progresses [Walterfang et al 2011]. In addition, the pontine:midbrain ratio correlates with oculomotor function and disease severity [Walterfang et al 2012a].

Studies of magnetic resonance spectroscopy (MRS) suggested that MRS may be a more sensitive imaging technique in NPC than standard MRI [Tedeschi et al 1998]. A French group has reported improvement in MRS parameters with miglustat therapy [Galanaud et al 2009].

Biochemical. Until recently, definitive diagnosis of NPC required demonstration of abnormal intracellular cholesterol homeostasis in cultured fibroblasts [Pentchev et al 1985]. These cells show reduced ability to esterify cholesterol after loading with exogenously derived LDL cholesterol. Filipin staining demonstrates an intense punctate pattern of fluorescence concentrated around the nucleus, consistent with the accumulation of unesterified cholesterol:

  • Classic. Most individuals have zero or very low esterification levels with a classic staining pattern.
  • Variant. About 15% of individuals have intermediate or "variant" levels of cholesterol esterification and a less distinctive staining pattern. More precise characterization of the biochemical defect in this group can be achieved by the use of BODIPY-lactosylceramide to identify lipid trafficking abnormalities [Sun et al 2001].

Histology. Other tests, including tissue biopsies and tissue lipid analysis, which were essential for diagnosis before recognition of the biochemical defect in NPC, are now rarely needed. These tests include examination of bone marrow, spleen, and liver, which contain foamy cells (lipid-laden macrophages); sea-blue histiocytes may be seen in the marrow in advanced cases. Electron microscopy of skin, rectal neurons, liver, or brain may show polymorphous cytoplasmic bodies [Boustany et al 1990].

Heterozygotes

In 2004, a report attributed tremor in an individual to presence of a heterozygous NPC1 pathogenic variant [Josephs et al 2004]. More recently a study of 20 obligate heterozygotes for NPC1 pathogenic variants found varying manifestations that are typically seen in compound heterozygotes, including hepatosplenomegaly, increased cholestane triol levels, hyposmia, REM sleep behavior disorder, and typical ocular motor abnormalities [Bremova-Ertl et al 2020]. It will be important for prospective studies of larger cohorts of heterozygotes to confirm these findings.

Genotype-Phenotype Correlations

NPC1. In the approximately 200 pathogenic variants described in NPC1 at the time of the cited studies [Scott & Ioannou 2004, Fernandez-Valero et al 2005], genotype-phenotype correlation was limited because (1) most affected individuals were compound heterozygotes and (2) correlation of the trafficking defects demonstrable in culture and the clinical phenotype was poor.

Nonetheless, the following correlations have been possible for homozygous pathogenic variants and the more common pathogenic variants in the compound heterozygous state:

  • No individuals with p.Ile1061Thr had early-infantile NPC in one international study that included the Hispanic population in the upper Rio Grande Valley of the southwestern US, as well as the UK and France [Millat et al 1999].
  • Premature-termination-codon variants, variants involving the sterol-sensing domain, and p.Ala1054Thr in the cysteine-rich luminal loop of NPC1 are associated with early-infantile NPC [Millat et al 2001].
  • In 40 unrelated individuals of Spanish descent, those who were homozygous for the p.Gln775Pro pathogenic variant had early-infantile NPC and those homozygous for the p.Cys177Tyr pathogenic variant had late-infantile NPC [Fernandez-Valero et al 2005].
  • All variants that correlate with the biochemical "variant" phenotype (i.e., patterns of filipin staining in cultured fibroblasts that are less intense than those typically seen in homozygotes or compound heterozygotes and overlap with those seen in heterozygotes) cluster in the cysteine-rich luminal loop [Millat et al 2001].

NPC2

  • Of the five pathogenic variants identified by Millat et al [2001], all but c.190+5G>A were associated with early-infantile NPC.
  • The two individuals with splice site variants had juvenile-onset disease and prolonged survival.
  • Adult-onset disease with frontal lobe atrophy has been described in association with the p.Val39Met variant [Klünemann et al 2002].
  • Neonatal or infantile onset and death in early childhood were reported in children homozygous for p.Gln45Ter, p.Cys47Ter, and p.Cys99Arg, whereas prolonged survival into middle adult life has been seen in those homozygous for p.Val39Met and p.Ser67Pro [Chikh et al 2005].

Nomenclature

The older literature on NPC is bedeviled by the large number of terms used to describe individuals now known to have the disease. These include juvenile dystonic idiocy, juvenile dystonic lipidosis, juvenile NPC, neurovisceral lipidosis with vertical supranuclear gaze palsy, Neville-lake disease, sea-blue histiocytosis, lactosylceramidosis, and DAF (downgaze paralysis, ataxia, foam cells) syndrome.

The term Niemann-Pick disease type D describes a genetic isolate from Nova Scotia that is biochemically and clinically indistinguishable from NPC and that also results from biallelic pathogenic variants in NPC1.

The terms Niemann-Pick disease type C1 (NPC1) and Niemann-Pick disease type C2 (NPC2) are now preferred because they correspond with the associated genes (NPC1 and NPC2).

Prevalence

The prevalence of NPC has been estimated at 1:150,000 in Western Europe.

The incidence of NPC in France has been calculated at about 1:120,000, based on the number of postnatally diagnosed individuals in a ten-year period versus the number of births during that same time period. When prenatal cases that did not result in a live-born infant were included, a slightly higher incidence of 1:100,000 was found [Vanier 2010].

The prevalence of NPC in early life is probably underestimated, owing to its nonspecific presentations. The overall prevalence is likely higher than the calculated incidence, owing to relatively prolonged survival in those with later-onset disease, although no comprehensive data are available.

Acadians in Nova Scotia and a Bedouin group in Israel represent genetic isolates with a founder effect (see Table 8).

Differential Diagnosis

Neonatal and infantile presentations include acquired conditions such as biliary atresia, congenital infections (e.g., TORCH), malignancies (leukemia, lymphoma, histiocytosis), and hereditary disorders (see Table 3).

A study from Colorado found that 27% of infants initially diagnosed with idiopathic neonatal cholestasis and 8% of all infants with cholestasis had Niemann-Pick disease type C (NPC) [Yerushalmi et al 2002]. Although this cohort may have been enriched by a local Hispanic genetic isolate, the importance of NPC as a cause of jaundice in infants is appropriately emphasized.

Table 3.

Hereditary Disorders in the Differential Diagnosis of Niemann-Pick Disease Type C – Neonatal and Infantile Presentations

GeneDisorderMOIClinical Characteristics
FAHTyrosinemia type IARIf untreated, usually presents either in young infants w/severe liver involvement or later in 1st yr w/liver dysfunction & significant renal involvement, growth failure, & rickets
SERPINA1Alpha-1-antitrypsin deficiencyARMay present w/hepatic dysfunction from infancy, or w/obstructive lung disease &/or bronchiectasis typically after age 30 yrs
Storage diseases including:
GBAGaucher disease type 2 (acute or infantile)ARCNS involvement, hepatomegaly, splenomegaly, cytopenia, pulmonary disease, & dermatologic changes
SMPD1Niemann-Pick disease type AARHepatosplenomegaly is typically noted by age 3 mos; over time liver & spleen become massive.
Niemann-Pick disease type BARLater onset & milder in manifestations than NPD-A; hepatosplenomegaly w/progressive hypersplenism & stable liver dysfunction

AR = autosomal recessive; MOI = mode of inheritance; NPD-A = Niemann-Pick disease type A

Childhood presentations include acquired conditions such as pineal region or midbrain tumors causing dorsal midbrain syndrome, hydrocephalus, attention-deficit disorder, learning disabilities, absence seizures, other dementing illnesses, pseudodementia (depressive disorder), HIV encephalopathy, sleep disorders, and syncope. Hereditary disorders to consider include subacute necrotizing encephalomyelopathy (see Mitochondrial DNA-Associated Leigh Syndrome and NARP and Nuclear Gene-Encoded Leigh Syndrome Spectrum Overview), mitochondrial disorders, hereditary dystonias, and the conditions summarized in Table 4.

Table 4.

Hereditary Disorders in the Differential Diagnosis of Niemann-Pick Disease Type C – Childhood Presentations

GeneDisorder